Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927704.1_cds_XP_016475447.1_67377
CDS Infomation

[gene=LOC107797100] [db_xref=GeneID:107797100] [protein=glucan endo-1,3-beta-glucosidase 8-like] [protein_id=XP_016475447.1] [location=complement(join(63219..64323,66014..66333))] [gbkey=CDS]
Sequence

ATGTTGAAAGTTGGGATATTTGTGGTTTGTTTATTGTATTTGAGTGGGGTGGAAGGGCTA
GGAGTGAACTGGGGAACAATGGCAACGCACAAGTTGCCACCAAAAACAGTGGTGCAGCTG
CTGAAGGACAATGGTATTGGGAAGGTGAAGCTGTTTGATGCAGATCAATCAACCATGAGT
GCTCTTGCTGGTAGTGATATTGAAGTTATGGTTGCCATTCCCAATGATCAGCTTTCTGCT
ATGAATGATTATCATCGAGCTAAAGATTGGGTCAGACGCAATGTCACCCGCTACAATTTC
AAAGGAGGTGTCAATATCAAGTATGTTGCAGTTGGTAATGAGCCTTTCTTGACATCGTAC
AACAACTCCTTTATTAACACGACCTTCCCAGCACTTGAGAACATCCAAAATGCTCTAAAT
GAAGCAGGACTTGGGAACTCCATAAAAGCAACTGTACCTCTAAATGCCGATGTTTATTTC
TCTCCAGAGAGCAATCCCGTGCCCTCTGCTGGGAGATTCCGACAGGACATTAATGATCTA
ATGACCCAGATGGTGCAGTTCATGAACCAGAACAACGCACCTTTCACAGTAAACATTTAC
CCCTTTTTGAGTCTTTATGCTAATGAGCATTTCCCTGTTGACTTTGCCTTCTTTGATGGA
GCCAGTAACCCCATTCTTGATAAAGGAGTCACATACACCAATGTATTTGATGCCAACTTT
GATACCCTAGTTTCAGCTTTGAGGGCAGCAGGTGTTGGCAACATGACCATTCTTGTTGGG
GAAGTTGGGTGGCCCACGGATGGTGACAAAAATGCCAATGTCAATCTTGCTTATCGGTTC
TATAAGGGGCTGTTATCCAGGCTTGCAGCCAACACGGGAACGCCTCTTCGGCCTGGATAT
ATTGAAGTTTACTTGTTTGGGCTTATCGACGAGGATGGTAAAAGTATTGCTCCTGGTAAC
TTTGAGCGCCACTGGGGAATCTTCCGGTATGATGGACAGCCAAAGTTTTCCATGGACCTT
ACAGGTCAGGGACAAGATAAGTTTCTCGTAGGTGCACAAAATGTGGAATATTTACCTAAG
AAATGGTGCATGCTTAATCCGAATGCCAAGGATTTGAGCAAACTTGCAGATAACATCAAC
TATGCTTGCACATTCTCAGATTGCACAGCATTAGGATATGGTTCTTCGTGCAATGGTTTG
GATGCAAATGGTAATGCATCATATGCTTTTAATATGTATTTCCAAGCTCAGAACCAAGGA
GATTTCAGTTGTGGTTTTCAGGGTCTGGCAATGGTAACGGATCAGAATATATCTCAAGCA
AACTGTAATTTCACCATCCAGATAGCTTATTCTTTCTCTCCAAAACTATTGCCAGGCCCC
GGGGTCATCGCATTTCTTACTGCCTTCACATTTATTTTACTATAG

Peptide Sequence

PEP ID

XP_016475447.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Nicotiana tabacum]
Sequence

MLKVGIFVVCLLYLSGVEGLGVNWGTMATHKLPPKTVVQLLKDNGIGKVKLFDADQSTMS
ALAGSDIEVMVAIPNDQLSAMNDYHRAKDWVRRNVTRYNFKGGVNIKYVAVGNEPFLTSY
NNSFINTTFPALENIQNALNEAGLGNSIKATVPLNADVYFSPESNPVPSAGRFRQDINDL
MTQMVQFMNQNNAPFTVNIYPFLSLYANEHFPVDFAFFDGASNPILDKGVTYTNVFDANF
DTLVSALRAAGVGNMTILVGEVGWPTDGDKNANVNLAYRFYKGLLSRLAANTGTPLRPGY
IEVYLFGLIDEDGKSIAPGNFERHWGIFRYDGQPKFSMDLTGQGQDKFLVGAQNVEYLPK
KWCMLNPNAKDLSKLADNINYACTFSDCTALGYGSSCNGLDANGNASYAFNMYFQAQNQG
DFSCGFQGLAMVTDQNISQANCNFTIQIAYSFSPKLLPGPGVIAFLTAFTFILL

Transcript Sequence

Gene sequence data has not been registered.